| 09/02/06 | at | Washburn | 21-41 |
| 09/09/06 | hosting | Fort Hays St | 31-24 |
| 09/16/06 | hosting | Adams St | 7-26 |
| 09/23/06 | at | Chadron St | 0-57 |
| 09/30/06 | hosting | OK Panhandle St | 69-0 |
| 10/07/06 | hosting | New Mexico Highlands | 16-19 |
| 10/14/06 | at | Western New Mexico | 10-6 |
| 10/21/06 | hosting | Fort Lewis | 34-41 |
| 10/28/06 | at | Nebraska-Kearney | 20-14 |
| 11/04/06 | hosting | Mesa St | 22-28 |
| 11/11/06 | at | Western St CO | 13-21 |