| 08/31/06 | hosting | Rhode Island | 52-7 |
| 09/16/06 | hosting | Wake Forest | 13-24 |
| 09/23/06 | at | Indiana | 14-7 |
| 09/30/06 | hosting | Navy | 17-41 |
| 10/07/06 | at | South Florida | 16-38 |
| 10/14/06 | hosting | Army | 21-7 |
| 10/20/06 | hosting | West Virginia | 11-37 |
| 10/29/06 | at | Rutgers | 13-24 |
| 11/11/06 | hosting | Pittsburgh | 46-45 2OT |
| 11/18/06 | at | Syracuse | 14-20 |
| 11/25/06 | hosting | Cincinnati | 23-26 |
| 12/02/06 | at | Louisville | 17-48 |