| 09/02/06 | at | New Mexico | 17-6 |
| 09/09/06 | hosting | Northern Colorado | 45-3 |
| 09/16/06 | at | California | 16-42 |
| 09/23/06 | at | Weber St | 20-10 |
| 09/30/06 | hosting | Montana | 20-26 |
| 10/07/06 | at | Montana St | 0-14 |
| 10/14/06 | hosting | Idaho St | 34-13 |
| 10/21/06 | hosting | Eastern Washington | 34-0 |
| 10/28/06 | at | Oregon | 12-55 |
| 11/04/06 | at | Northern Arizona | 34-26 |
| 11/11/06 | at | Sacramento St | 13-7 |