| 08/31/06 | at | Tennessee Tech | 31-7 |
| 09/09/06 | at | Memphis | 14-33 |
| 09/16/06 | at | Western Kentucky | 21-28 |
| 09/23/06 | hosting | Georgia Southern | 27-26 |
| 09/30/06 | at | The Citadel | 21-24 |
| 10/07/06 | hosting | Appalachian St | 21-56 |
| 10/14/06 | at | Western Carolina | 17-14 |
| 10/21/06 | at | Furman | 22-28 |
| 10/28/06 | hosting | Elon | 17-20 |
| 11/04/06 | hosting | Jacksonville St | 10-13 |
| 11/11/06 | at | Wofford | 0-55 |