| 09/02/06 | hosting | UW-La Crosse | 3-17 |
| 09/09/06 | at | Montana | 7-36 |
| 09/16/06 | at | Northern Iowa | 17-27 |
| 09/23/06 | at | Nicholls St | 24-17 |
| 09/30/06 | at | McNeese St | 20-17 |
| 10/07/06 | hosting | Central Arkansas | 20-7 |
| 10/21/06 | at | Cal Poly SLO | 29-28 |
| 10/28/06 | hosting | UC-Davis | 22-21 |
| 11/04/06 | hosting | William Penn | 34-3 |
| 11/11/06 | at | Southern Utah | 31-21 |
| 11/18/06 | at | North Dakota St | 28-41 |