| 09/01/06 | hosting | Azusa Pacific | 27-0 |
| 09/09/06 | hosting | Dixie St | 41-7 |
| 09/16/06 | at | Yale | 43-17 |
| 09/30/06 | at | Davidson | 50-21 |
| 10/07/06 | hosting | Butler | 56-3 |
| 10/14/06 | hosting | Valparaiso | 68-7 |
| 10/21/06 | at | Drake | 37-0 |
| 10/28/06 | hosting | Morehead St | 44-21 |
| 11/04/06 | at | Jacksonville FL | 38-21 |
| 11/11/06 | hosting | Dayton | 56-14 |
| 11/25/06 | at | UC-Davis | 27-37 |
| 12/02/06 | at | Monmouth NJ | 27-7 |