| 09/02/06 | at | OK Panhandle St | 69-6 |
| 09/09/06 | hosting | Winona St | 18-21 |
| 09/16/06 | hosting | Fort Hays St | 48-10 |
| 09/23/06 | at | SW Baptist | 35-31 |
| 09/30/06 | hosting | Pittsburg St | 57-59 |
| 10/07/06 | at | NW Missouri St | 17-49 |
| 10/14/06 | hosting | Truman St | 13-14 |
| 10/21/06 | at | Missouri Western | 12-24 |
| 10/28/06 | at | Washburn | 6-37 |
| 11/04/06 | at | Central Missouri | 21-48 |
| 11/11/06 | hosting | Missouri Southern | 33-34 |