| 09/02/06 | hosting | Ouachita Baptist | 28-22 |
| 09/09/06 | at | Harding | 30-27 |
| 09/16/06 | hosting | SW Baptist | 42-21 |
| 09/23/06 | at | Pittsburg St | 24-48 |
| 09/30/06 | hosting | NW Missouri St | 7-24 |
| 10/07/06 | at | Truman St | 28-35 |
| 10/14/06 | hosting | Missouri Western | 17-24 |
| 10/21/06 | hosting | Central Missouri | 31-26 |
| 10/28/06 | at | Fort Hays St | 0-10 |
| 11/04/06 | hosting | Washburn | 13-14 |
| 11/11/06 | at | Emporia St | 34-33 |