| 09/02/06 | hosting | TAMU-Commerce | 14-17 |
| 09/09/06 | at | Colorado Mines | 24-31 |
| 09/16/06 | at | Emporia St | 10-48 |
| 09/23/06 | hosting | Washburn | 7-37 |
| 09/30/06 | hosting | Central Missouri | 14-37 |
| 10/07/06 | at | SW Baptist | 21-39 |
| 10/14/06 | hosting | Pittsburg St | 28-35 |
| 10/21/06 | at | NW Missouri St | 0-59 |
| 10/28/06 | hosting | Missouri Southern | 10-0 |
| 11/04/06 | at | Missouri Western | 10-24 |
| 11/11/06 | hosting | Truman St | 15-40 |